Visual Linkage and Interactive Features of Evidente for an Enhanced Analysis of SNP-based Phylogenies

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dc.contributor.authorWitte Paz, Mathiasen_US
dc.contributor.authorHarbig, Theresaen_US
dc.contributor.authorVarga, Doloresen_US
dc.contributor.authorKränzle, Eileenen_US
dc.contributor.authorNieselt, Kayen_US
dc.contributor.editorGillmann, Christinaen_US
dc.contributor.editorKrone, Michaelen_US
dc.contributor.editorLenti, Simoneen_US
dc.date.accessioned2023-06-10T06:31:40Z
dc.date.available2023-06-10T06:31:40Z
dc.date.issued2023
dc.description.abstractPhylogenetic trees of a set of bacterial strains are often used to analyze their evolutionary relationships and they are commonly based on genomic features, such as single nucleotide polymorphisms (SNPs). Evidente - a recently published tool - provides visual and analytical linkage across a phylogenetic tree, SNP data and metadata, and integrates them into one interactive visual analytics platform. In contrast to other approaches, Evidente shows how SNPs agree with the tree structure. Evidente is part of the TueVis server (https://evidente-tuevis.cs.uni-tuebingen.de/). Here, we give an overview of the tasks supported by Evidente. The version of Evidente described in the publication can seamlessly visualize up to 150 strains. Thus, we introduce further enhancements for larger trees, such as data-driven aggregation and semantic zooming.en_US
dc.description.seriesinformationEuroVis 2023 - Posters
dc.identifier.doi10.2312/evp.20231075
dc.identifier.isbn978-3-03868-220-2
dc.identifier.pages89-91
dc.identifier.pages3 pages
dc.identifier.urihttps://doi.org/10.2312/evp.20231075
dc.identifier.urihttps://diglib.eg.org:443/handle/10.2312/evp20231075
dc.publisherThe Eurographics Associationen_US
dc.rightsAttribution 4.0 International License
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.titleVisual Linkage and Interactive Features of Evidente for an Enhanced Analysis of SNP-based Phylogeniesen_US
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