Browsing by Subject "J.3 [Computer Applications]"
Now showing items 1-20 of 39
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Atomistic Visualization of Mesoscopic Whole-Cell Simulations
(The Eurographics Association, 2012)Molecular visualizations are a principal tool for analyzing the results of biochemical simulations. With modern GPU ray casting approaches it is only possible to render several millions of atoms at interactive frame rates ... -
Atomistic Visualization of Mesoscopic Whole-Cell Simulations Using Ray-Casted Instancing
(The Eurographics Association and Blackwell Publishing Ltd., 2013)Molecular visualization is an important tool for analysing the results of biochemical simulations. With modern GPU ray casting approaches, it is only possible to render several million of atoms interactively unless advanced ... -
Cell Lineage Visualisation
(The Eurographics Association and John Wiley & Sons Ltd., 2015)Cell lineages describe the developmental history of cell populations and are produced by combining time-lapse imaging and image processing. Biomedical researchers study cell lineages to understand fundamental processes ... -
Comparison of Multiple Weighted Hierarchies: Visual Analytics for Microbe Community Profiling
(The Eurographics Association and Blackwell Publishing Ltd., 2011)We propose visual analytics techniques to support concurrent comparison of hundreds of cumulatively weighted instances of a single hierarchy. This includes a node-link representation of the hierarchy where nodes depict the ... -
CoWRadar: Visual Quantification of the Circle of Willis in Stroke Patients
(The Eurographics Association, 2015)This paper presents a method for the visual quantification of cerebral arteries, known as the Circle of Willis (CoW). The CoW is an arterial structure that is responsible for the brain's blood supply. Dysfunctions of this ... -
Discovering Medical Knowledge Using Visual Analytics
(The Eurographics Association, 2015)Due to advanced technologies, the amount of biomedical data has been increasing drastically. Such large data sets might be obtained from hospitals, medical practices or laboratories and can be used to discover unknown ... -
Extending the Scaffold Hunter Visualization Toolkit with Interactive Heatmaps
(The Eurographics Association, 2015)In many application areas, large amounts of data arise, which are often hard to interpret or make use of by humans. Interactive visualization can help to overview and explore large amounts of data. An example is in the ... -
FoldSynth: Interactive 2D/3D Visualisation Platform for Molecular Strands
(The Eurographics Association, 2015)FoldSynth is an interactive platform designed to help understand the characteristics and commonly used visual abstractions of molecular strands with an emphasis on proteins and DNA. It uses a simple model of molecular ... -
Grontocrawler: Graph-Based Ontology Exploration
(The Eurographics Association, 2015)Biomedical ontologies helps discover hidden semantic links between heterogeneous and multi-scale biomedical datasets. Computational methods to ontology analysis may provide a semantic flavor to data analysis of biomedical ... -
HumMod Browser: An Exploratory Visualization Tool for Model Validation of Whole-Body Physiology Simulation
(The Eurographics Association, 2013)We present HumMod Browser, a multi-scale exploratory visualization tool that lets physiologists validate human physiology simulation results. Showing correlations, exploring causality relationships, analyzing important ... -
The iCoCooN: Integration of Cobweb Charts with Parallel Coordinates for Visual Analysis of DCE-MRI Modeling Variations
(The Eurographics Association, 2014)Efficacy of radiotherapy treatment depends on the specific characteristics of tumorous tissues. For the determination of these characteristics, clinical practice uses Dynamic Contrast Enhanced (DCE) Magnetic Resonance ... -
Information Fusion for Real-time Motion Estimation in Image-guided Breast Biopsy Navigation
(The Eurographics Association, 2014)A real-time delivery of accurate soft-tissue intervention navigation information is one of the most crucial aspects for accepting the soft-tissue navigation systems for intra-operative use. Currently, soft-tissue navigation ... -
Integrated Visualization and Analysis of a Multi-scale Biomedical Knowledge Space
(The Eurographics Association, 2014)The study and analysis of relationships in a complex and multi-scale data set is a challenge of information and scientific visualization. This work proposes an integrated visualization to capture all the important aspects ... -
Interactive Exploration of Protein Cavities
(The Eurographics Association and Blackwell Publishing Ltd., 2011)We present a novel application for the interactive exploration of cavities within proteins in dynamic data sets. Inside a protein, cavities can often be found close to the active center. Therefore, when analyzing a molecular ... -
Interactive Extraction and Tracking of Biomolecular Surfaces Features
(The Eurographics Association and Blackwell Publishing Ltd., 2013)We present a coordinated-view application for the analysis of molecular surface features like cavities, channels and pockets. Our tool employs object-space ambient occlusion for the detection of such features and tracks ... -
Interactive Labeling of Toponome Data
(The Eurographics Association, 2014)Biological multi-channel microscopy data are often characterized by a high local entropy and phenotypically identical structures covering only a few pixels and forming disjoint regions spread over, e.g., a cell or a tissue ... -
Real-Time Guidance and Anatomical Information by Image Projection onto Patients
(The Eurographics Association, 2016)The Image Projection onto Patients (IPoP) system is work in progress intended to assist medical practitioners perform procedures such as biopsies, or provide a novel anatomical education tool, by projecting anatomy and ... -
Regularised Anisotropic Nonlinear Diffusion for Rendering Refraction in Volume Graphics
(The Eurographics Association, 2005)Rendering refraction in volume graphics requires smoothly distributed normals to synthesise good quality visual representations. Such refractive visualisation is more susceptible to noise in the data than visualisations ... -
Rendering Molecular Surfaces using Order-Independent Transparency
(The Eurographics Association, 2013)In this paper we present a technique for interactively rendering transparent molecular surfaces. We use Puxels, our implementation of per-pixel linked lists for order-independent transparency rendering. Furthermore, we ... -
Schematic Electrode Map for Navigation in Neuro Data Sets
(The Eurographics Association, 2015)Neuro resection surgery is one of the last resorts when treating epilepsy patients where conservative treatment shows no effect on seizure reduction. However, due to the severity of the surgery, the resection planning has ...